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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935769.1_cds_XP_016481511.1_72834
CDS Infomation

[gene=LOC107802508] [db_xref=GeneID:107802508] [protein=mitogen-activated protein kinase kinase kinase YODA-like] [protein_id=XP_016481511.1] [location=complement(join(30448..30679,30865..30965,31097..31294,31590..31799,31987..32062,32269..32432,32517..32579,33109..33196,33277..33867,36713..37146))] [gbkey=CDS]
Sequence

ATGCCGAATATATGGAAAGCATTTTCACTATCATCAAGCTCATCCCACTCTTCTTCTTCT
TCTTCTTCAACTAGTACTACTTCTCCTACAGGTTCTCCAAATACACGTAGGTTTTACGGC
GGGCGAAGGAGACTGATTAGGCAGCGTAAATTGCGGCACGTTAGTGATGATGAGCTTGGT
TTGCGGGGCCTCAATATTCAGTCCTTAATTATTGATGAACGTTCGAAATCCTTACCGGTT
TCTCCTGAGTTTTATGTGGATTTCGGGTCGGGTTCTCGGTCGCCCCACCACCTCCGTCAC
TGTTCCAAGTCCTCCCCTGTGCCACTGCCGTTGCCGCTTCCTGAGCTCAATTCTCTTCCC
AAACAGAACTCAGCGGTTGACTCTAATTTGCCGGTTAGAGTTGACAGGGATCCTTTAAGC
CCTCCTCTTGCAAGGGATACTTCTGATCGGACTCCAGCGGAGGTGACAAGTTCTCAGCAT
CCAAGATCATCTACTCCAACTTACCGACGTAGGAGGTTCCCTCAGGATCTGAATGCTGAG
GGTGTTGAATTCAGGCTGAATGTTCCTGCTAGAAGTGCTCCAGGTAGTGGTTTTACGAGC
CCCGTCCCAAGCCCAAAAAGGTTTAGCACACAGGACCTTTTCCAACCTCCATTTCATCAG
CCGTCATCACCTTCAGAGGCTTACTCTTTCCAACTTTCACCCACAAGGGTTATAAACAGT
GCTGATCATTCTCCACTAAGTAGCCCAACATTACCAAATCCAGTTAATAGAACCAGGAAT
CACAGAAGTAGTGCTGTGCATTCTCATCATAAATCTCTTCCGGAAAGTTCTCTGGCTTGG
ACTGAAGGTAATAACATCGATGTCCACCCGCTACCCCTTCCACCAGGAGTTCAAAGACAT
CCAGAATTATGTACCATCCAAAGCAATATGGATAAACCGTGTATATCACCAACAAAGGGT
CAATGGCTAAAGGGGAAGCTTTTAGGTCGTGGTACATATGGAAGTGTATATGAAGCTACC
AACCGTGAAACCGGTGCTTTATGTGCAATAAAAGAAGTTGATCTTACTCCTGATGATCCT
AAATCTGCTGAATGTATAAAGCAGTTAGAACAGGAAATAAGAGTTCTCCGGCAGTTAAAG
CACCCAAATATTGTTCAATATTATGGTAGTGAAATAATGGAGGACCGCTTTTGCATATAT
TTGGAATATGTGCACCCCGGATCAATTAATAAGTATGTTCGGGAACATTGCGGAGCTATG
ACAGAATCAATAGTTCGAAACTTTACTAGGCATATTGTATCAGGGTTGGCTTACTTGCAT
AGCACCAAGACAATACACAGGGACATTAAGGGAGCAAATTTGCTTGTAGATGCATCTGGC
ATTGTCAAGCTTGCAGACTTTGGATTAGCAAAACATCTTTCCAGCTGTGCAACTGATCTT
TCTCTGAAAGGGAGCCCTCATTGGATNTGTGCTTATGTCTGGCCATCACTTCATATGCAG
GTAATGCAGGCTGTGTTGCGGAAAGATGCCAATCCAGAGCTTGCCTTTGCTGTCGATATA
TGGAGCCTTGGTTGCACTGTTATTGAGATGTTTAATGGACAGCCCCCGTGGGGTGAATTT
AATGGGGTGCAAGCTATGTTCAGTGTTTTGCACAAATCACCACCTATACCAGAAAAATTA
TCTTCAGAAGGGAAGGATTTCCTCTGGTGCTGCTTTCAGAGGAAACCTGCAGATAGGCCA
TCAGCTATGATGCTACTCGAGCATGCTTTTTTACGTAATACTGTTGCTGGTTGTTCAGAG
GATTTTTCAGGGATGAAATTACATGATGCTCTGCAGAGTCCTAAGGACCCAACTAACCAT
AAAAAGGAACTAAAGCCACTTTTACCAGGAACTTCCGCCAGGCATGGAAAATCACCATAT
AGCAGTGAAAATTGCCAGCAAACTCATCCTGAAACCTGTGAGTACGGAGCAGCTTCTCAC
CACTCTCCCCGTTCTACACTTGAAGTCCTTCCCTGTATTTCTTCACTGGAGCTGAACTCA
AGTTCGCGTGCAGCCAGTCCCCCAAGCATTCCTAGTAGCTTACCCCTGGGACCTGAAAAC
AGAAGTCCTTGTAGGAACATAAGAAAGGGAACACCAAACATCTGTATAAGATCATAA

Peptide Sequence

PEP ID

XP_016481511.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana tabacum]
Sequence

MPNIWKAFSLSSSSSHSSSSSSSTSTTSPTGSPNTRRFYGGRRRLIRQRKLRHVSDDELG
LRGLNIQSLIIDERSKSLPVSPEFYVDFGSGSRSPHHLRHCSKSSPVPLPLPLPELNSLP
KQNSAVDSNLPVRVDRDPLSPPLARDTSDRTPAEVTSSQHPRSSTPTYRRRRFPQDLNAE
GVEFRLNVPARSAPGSGFTSPVPSPKRFSTQDLFQPPFHQPSSPSEAYSFQLSPTRVINS
ADHSPLSSPTLPNPVNRTRNHRSSAVHSHHKSLPESSLAWTEGNNIDVHPLPLPPGVQRH
PELCTIQSNMDKPCISPTKGQWLKGKLLGRGTYGSVYEATNRETGALCAIKEVDLTPDDP
KSAECIKQLEQEIRVLRQLKHPNIVQYYGSEIMEDRFCIYLEYVHPGSINKYVREHCGAM
TESIVRNFTRHIVSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGLAKHLSSCATDL
SLKGSPHWXCAYVWPSLHMQVMQAVLRKDANPELAFAVDIWSLGCTVIEMFNGQPPWGEF
NGVQAMFSVLHKSPPIPEKLSSEGKDFLWCCFQRKPADRPSAMMLLEHAFLRNTVAGCSE
DFSGMKLHDALQSPKDPTNHKKELKPLLPGTSARHGKSPYSSENCQQTHPETCEYGAASH
HSPRSTLEVLPCISSLELNSSSRAASPPSIPSSLPLGPENRSPCRNIRKGTPNICIRS

Transcript Sequence

Gene sequence data has not been registered.